Curriculum Vitae

Personal details

Henrik Hornshøj
Danish
English, speak and write fluently
39

Employment history

Start End Position Location
2008 current Scientist Department of Genetics and Biotechnology, Aarhus University
2005 2008 Ph.D student Department of Molecular Biology, Aarhus University
2002 2005 Research Assistant Department of Genetics and Biotechnology, Aarhus University
2001 2001 Bioinformaticist Helixense, Singapore
2000 2001 Technical Coordinator Aventis CropScience, Copenhagen

Education

Start End Title Location
2005 2008 Ph.D Bioinformatics Department of Molecular Biology, Aarhus University
1997 1999 M.Sc. Molecular Biology Department of Plant Biology and Biotechnology, University of Copenhagen

Awards and Funding

Teaching and supervision experience

Publications - peer reviewed

Year Title Authors Reference
2012 Gene expression profiling of porcine skeletal muscle in the early recovery phase following acute physical activity Jensen JH, Conley LN, Hedegaard J, Nielsen M, Young JF, Oksbjerg N, Hornshøj H, Bendixen C, Thomsen B Exp Physiol. 2012 Feb 15. [Epub ahead of print]
2011 Regulation of basal resistance by a powdery mildew-induced cysteine-rich receptor-like protein kinase in barley Rayapuram C, Jensen MK, Maiser F, Shanir JV, Hornshøj H, Rung JH, Gregersen PL, Schweizer P, Collinge DB, Lyngkjaer MF Mol Plant Pathol. 2011 Aug 7
2009 Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies Hornshøj H, Bendixen E, Conley LN, Andersen PK, Hedegaard J, Panitz F, Bendixen C BMC Genomics. 2009 Jan 19;10:30
2009 Methods for interpreting lists of affected genes obtained in a DNA microarray experiment Hedegaard J, Arce C, Bicciato S, Bonnet A, Buitenhuis B, Collado-Romero M, Conley LN, Sancristobal M, Ferrari F, Garrido JJ, Groenen MA, Hornshøj H, Hulsegge I, Jiang L, Jiménez-Marín A, Kommadath A, Lagarrigue S, Leunissen JA, Liaubet L, Neerincx PB, Nie H, van der Poel J, Prickett D, Ramirez-Boo M, Rebel JM, Robert-Granié C, Skarman A, Smits MA, Sørensen P, Tosser-Klopp G, Watson M BMC Proc. 2009 Jul 16;3 Suppl 4:S5
2009 Using microarrays to identify positional candidate genes for QTL: the case study of ACTH response in pigs Jouffe V, Rowe S, Liaubet L, Buitenhuis B, Hornshøj H, Sancristobal M, Mormède P, de Koning DJ BMC Proc. 2009 Jul 16;3 Suppl 4:S14
2009 A robust linkage map of the porcine autosomes based on gene-associated SNPs Vingborg RK, Gregersen VR, Zhan B, Panitz F, Høj A, Sørensen KK, Madsen LB, Larsen K, Hornshøj H, Wang X, Bendixen C BMC Genomics. 2009 Mar 27;10:134
2009 Gene set analysis methods applied to chicken microarray expression data Skarman A, Jiang L, Hornshøj H, Buitenhuis B, Hedegaard J, Conley LN, Sørensen P BMC Proc. 2009 Jul 16;3 Suppl 4:S8
2008 Gene expression profiles in liver of pigs with extreme high and low levels of androstenone Moe M, Lien S, Bendixen C, Hedegaard J, Hornshøj H, Berget I, Meuwissen TH, Grindflek E BMC Vet Res. 2008 Aug 6;4:29
2007 Analysis of the real EADGENE data set: multivariate approaches and post analysis Sørensen P, Bonnet A, Buitenhuis B, Closset R, Déjean S, Delmas C, Duval M, Glass L, Hedegaard J, Hornshøj H, Hulsegge I, Jaffrézic F, Jensen K, Jiang L, de Koning DJ, Lê Cao KA, Nie H, Petzl W, Pool MH, Robert-Granié C, San Cristobal M, Lund MS, van Schothorst EM, Schuberth HJ, Seyfert HM, Tosser-Klopp G, Waddington D, Watson M, Yang W, Zerbe H Genet Sel Evol. 2007 Nov-Dec;39(6):651-68. Epub 2007 Dec 6
2007 Analysis of the real EADGENE data set: comparison of methods and guidelines for data normalisation and selection of differentially expressed genes Jaffrézic F, de Koning DJ, Boettcher PJ, Bonnet A, Buitenhuis B, Closset R, Déjean S, Delmas C, Detilleux JC, Dovc P, Duval M, Foulley JL, Hedegaard J, Hornshøj H, Hulsegge I, Janss L, Jensen K, Jiang L, Lavric M, Lê Cao KA, Lund MS, Malinverni R, Marot G, Nie H, Petzl W, Pool MH, Robert-Granié C, San Cristobal M, van Schothorst EM, Schuberth HJ, Sørensen P, Stella A, Tosser-Klopp G, Waddington D, Watson M, Yang W, Zerbe H, Seyfert HM Genet Sel Evol. 2007 Nov-Dec;39(6):633-50. Epub 2007 Dec 6
2007 The EADGENE Microarray Data Analysis Workshop de Koning DJ, Jaffrézic F, Lund MS, Watson M, Channing C, Hulsegge I, Pool MH, Buitenhuis B, Hedegaard J, Hornshøj H, Jiang L, Sørensen P, Marot G, Delmas C, Lê Cao KA, San Cristobal M, Baron MD, Malinverni R, Stella A, Brunner RM, Seyfert HM, Jensen K, Mouzaki D, Waddington D, Jiménez-Marín A, Pérez-Alegre M, Pérez-Reinado E, Closset R, Detilleux JC, Dovc P, Lavric M, Nie H, Janss L Genet Sel Evol. 2007 Nov-Dec;39(6):621-31. Epub 2007 Dec 6
2007 Microarray expression profiles of 20.000 genes across 23 healthy porcine tissues Hornshøj H, Conley LN, Hedegaard J, Sørensen P, Panitz F, Bendixen C PLoS One. 2007 Nov 21;2(11):e1203
2007 SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation Panitz F, Stengaard H, Hornshøj H, Gorodkin J, Hedegaard J, Cirera S, Thomsen B, Madsen LB, Høj A, Vingborg RK, Zahn B, Wang X, Wang X, Wernersson R, Jørgensen CB, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Brunak S, Fredholm M, Bendixen C Bioinformatics. 2007 Jul 1;23(13):i387-91
2007 Effects of bacterial colonization on the porcine intestinal proteome Danielsen M, Hornshøj H, Siggers RH, Jensen BB, van Kessel AG, Bendixen E J Proteome Res. 2007 Jul;6(7):2596-604. Epub 2007 Jun 2
2007 Molecular characterisation of the early response in pigs to experimental infection with Actinobacillus pleuropneumoniae using cDNA microarrays Hedegaard J, Skovgaard K, Mortensen S, Sørensen P, Jensen TK, Hornshøj H, Bendixen C, Heegaard PM Acta Vet Scand. 2007 Apr 27;49:11
2007 Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags Gorodkin J, Cirera S, Hedegaard J, Gilchrist MJ, Panitz F, Jørgensen C, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Rosenkilde C, Wang J, Li H, Li R, Liu B, Hu S, Dong W, Li W, Yu J, Wang J, Staefeldt HH, Wernersson R, Madsen LB, Thomsen B, Hornshøj H, Bujie Z, Wang X, Wang X, Bolund L, Brunak S, Yang H, Bendixen C, Fredholm M Genome Biol. 2007;8(4):R45
2005 Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing Wernersson R, Schierup MH, Jørgensen FG, Gorodkin J, Panitz F, Staerfeldt HH, Christensen OF, Mailund T, Hornshøj H, Klein A, Wang J, Liu B, Hu S, Dong W, Li W, Wong GK, Yu J, Wang J, Bendixen C, Fredholm M, Brunak S, Yang H, Bolund L BMC Genomics. 2005 May 10;6(1):70
2005 Comparative analysis of protein coding sequences from human, mouse and the domesticated pig Jørgensen FG, Hobolth A, Hornshøj H, Bendixen C, Fredholm M, Schierup MH BMC Biol. 2005 Jan 28;3:2
2004 SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based on ESTs with a non-target Tm algorithm for reducing cross-hybridization in microarray gene expression experiments Hornshøj H, Stengaard H, Panitz F, Bendixen C Bioinformatics. 2004 Feb 12;20(3):428-9. Epub 2004 Jan 22